Unlike the Indominus, indoraptors genetic makeup is largely unknown due to its being developed in the private sector rather than being sanctioned by InGen. However, some of its gene donors are known: Indominus rex: This hybrid animal was used as the base genome of the Indoraptor; this species was itself designed using the DNA of multiple dinosaurian and other animals. Other donor genes could be spliced into the Indominus genome to create the Indoraptor genome. It is likely that it inherited some of its ancestor's biological abilities, such as infrared output modulation or rapid metachrosis, but the full extent of this is not known. Velociraptor antirrhopus: While the Indominus genome already contained Velociraptor antirrhopus genes, the Indoraptor genome features a larger proportion of them. This resulted in altered behavioral and anatomical traits, including a smaller size and leaner build, heightened metacognitive abilities and other neurological differences, and (in theory) a greater propensity for social behavior. Later versions of Indoraptor were planned to specifically use V. a. masranii genes in order to encourage social bonding with this subspecies, but the subspecies used in the prototype is unknown. Scrotifera: At least one currently-unidentified genus of mammal was sourced for structural genes which would facilitate the development of anatomy allowing the Indoraptor to navigate using echolocation, according to the Jurassic World mobile games and other sources. Animals capable of advanced echolocation are microbats (as well as the megabat genus Rousettus) and toothed cetaceans. While some other animals are capable of more crude forms of echolocation, the advanced nature of the Indoraptor's echolocatory abilities suggest that the genes sourced for this ability come from either the microbats or toothed cetaceans, placing the origin of the genes somewhere within the clade Scrotifera.

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